Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815955.1_cds_XP_016498560.1_12577
CDS Infomation

[gene=LOC107817270] [db_xref=GeneID:107817270] [protein=probable serine/threonine-protein kinase At1g54610] [protein_id=XP_016498560.1] [location=join(1660..2073,2366..2650,2771..3088,3919..4146,5602..5702,6038..6152,7057..7524,8059..8274)] [gbkey=CDS]
Sequence

ATGGGTTGTGTTTGTGGAAAACCTTCCCTGGCTGCCAAAGATAGGCGGGATGTACAAAAG
AAGAGAGATTTTACAAAAGGGGCAAACGTGGCATCACGCGCGCCACGAGCTATTTCTTCA
AAGAGAGAGGAGAGTTTCAGGGTGAAAGACATGTTGGAAAATGGTGATGTGAAGCTTGGT
TTAATAGATAGGAAGAATAATGGATCAAGAAGGGTGAGGGATGATCATTACGAGCAGATA
AAGGAAAAGCTTGGACTCATTGTGAACGGTGGTCCTGGATATGGAGTTGTCCCAAAAGCG
TTGGAAGGGGAATTGGTTACTGTCGGATGGCCTTCTTGGCTTGCTGCAGTTGCCGGTGAA
GCTATTAATGGATGGCTTCCTCGTAAGGCCGATACATTCGAGAAATTAGACAAGATTGGC
CAAGGGACATATAGTAGCGTATACAAAGCTCGTGACCTAGTTAATGATAAAGTTGTTGCA
CTGAAAAGAGTGAGGTTTGATAATATGGATCCTGAAAGTGTCAAATTTATGGCAAGAGAG
ATAGTAATTTTGCGTAGGCTTGATCATCCGAATATTATCAAATTGGAAGGCTTGGTTACA
TCAAGATCATCTTGCAGTTTGTACCTTGTCTTTGAGTACATGGAACATGATCTTACTGGA
CTGGCATCTGTTCCTGATATCAAATTTACAGAACCACAGATGAAATGTTATATGCAGCAG
CTTCTTAGTGGACTTGATCATTGCCATAGTCGGGGTGTTTTGCATCGGGACATCAAAGGT
TCAAATCTTCTAATTGACAATCACGGCATCTTGAAAATTGCAGATTTTGGCTTAGCAACC
TTCTTTGATCATAAGCAAAGTGTTCCATTGACAAGCCGTGTTGTGACTCTTTGGTATCGA
CCACCCGAGCTCTTACTTGGAGCAAGTCATTATGGAGTCGCTGTAGATTTATGGAGTAGT
GGTTGCATACTTGGAGAATTATATGCCGGCAAGCCCATCATGCCTGGTAGAACAGAGGTA
GAGCAGCTGCATAAAATTTTTAAGCTTTGTGGTTCACCATCTGAGGATTACTGGAAAAAA
GAAAAATTACATCATTCAACAGCATTTAAGCCAATACATCCTTACAGACGGCGTATTGGA
GAAACCTTTAAGGATCTTCCTTCATCTGCCGTGAGGTTATTGGACACATTACTTTCTATA
GATCCTGAACTTAGGGGAACAGCTGGCGGTGCTCTTGAGAGCGAGTTCTTCATCACAAAG
CCATTGCCTTGTGATCCTTCAAGTTTGCCGAAGTACCCTCCCAGTAAGGAAATTGATGCA
AAACTGCGGGAAGAGGAAGCTCGAAGGCAAGGAGCTGCAGGAGTGAAGAGCCAAGTTGGT
GATGGGCATACAAGAGGATTGAAAGAAGTTCGCGTTGTCCCAGCACCTGATGCTAATGCC
GAGTTGGCTAGGTCAATGCAGAGGAGGCAGAGCAGTTCAAATCCTAAGAGCCAATCTGAG
CAGTTCAATCGCCACAAGGGAGCTGCTTCTGGTTTTCCAAACAATCCTCATAGACCATCA
CAACCAAGCAAAGAAACAGGCAGAGATCACTTGGAGAATCTTTCAGAGAGATTCTCTCAT
TCAGGACCTCTAGCTCCAGGATTTGGGTGGGTAAAATCTGGGAAGAAATATGATCATGAT
ATTTCTGTTGGTTCCAATAGACCCGACTTATCAAAGTTATCCAGTTTAGTAGCATCTAGG
TCAGTTGTGGCCTGTGATACTCGAGATCGATTTGCTGTTTCACATCTGGAATCTGCCCAT
CAAATAGAAAGGCCAGTACGCTTGCTTGATGAACACCCAAGGAAGCAGGATCAGAAGCGT
CATATGCAAAACCCTGCTGGTTCTCGTCAATTTGACAATGGAAGGGCCAGCGTCAAAGAA
TCAAATCTGCATGGACATGGTCACAAGGCAAACCAAATCCATTTTTCTGGTCCACTACTT
GTTCAACCGAATAAAGTGGATCAAATGCTGAAAGAGCACGATCGTCGTATCCAGGAAGCT
GCACGACGAGCAAGGCTCGAGAAGGCAAGAGCAGGTAAAGGTCAAGCTCAAGGAATGCAG
AGAACAAACAATTCTATTTATGTCACTAGTGTGGGATTGCGGTAG

Peptide Sequence

PEP ID

XP_016498560.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase At1g54610 [Nicotiana tabacum]
Sequence

MGCVCGKPSLAAKDRRDVQKKRDFTKGANVASRAPRAISSKREESFRVKDMLENGDVKLG
LIDRKNNGSRRVRDDHYEQIKEKLGLIVNGGPGYGVVPKALEGELVTVGWPSWLAAVAGE
AINGWLPRKADTFEKLDKIGQGTYSSVYKARDLVNDKVVALKRVRFDNMDPESVKFMARE
IVILRRLDHPNIIKLEGLVTSRSSCSLYLVFEYMEHDLTGLASVPDIKFTEPQMKCYMQQ
LLSGLDHCHSRGVLHRDIKGSNLLIDNHGILKIADFGLATFFDHKQSVPLTSRVVTLWYR
PPELLLGASHYGVAVDLWSSGCILGELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWKK
EKLHHSTAFKPIHPYRRRIGETFKDLPSSAVRLLDTLLSIDPELRGTAGGALESEFFITK
PLPCDPSSLPKYPPSKEIDAKLREEEARRQGAAGVKSQVGDGHTRGLKEVRVVPAPDANA
ELARSMQRRQSSSNPKSQSEQFNRHKGAASGFPNNPHRPSQPSKETGRDHLENLSERFSH
SGPLAPGFGWVKSGKKYDHDISVGSNRPDLSKLSSLVASRSVVACDTRDRFAVSHLESAH
QIERPVRLLDEHPRKQDQKRHMQNPAGSRQFDNGRASVKESNLHGHGHKANQIHFSGPLL
VQPNKVDQMLKEHDRRIQEAARRARLEKARAGKGQAQGMQRTNNSIYVTSVGLR

Transcript Sequence

Gene sequence data has not been registered.